Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cops4O88544 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cops4O88544 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Cops4O88544 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cops4O88544 Gm6159-201ENSMUST00000191249 1724 ntBASIC13□□□□□ -0.33
Cops4O88544 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cops4O88544 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Mir5131-201ENSMUST00000175426 93 ntBASIC13□□□□□ -0.33
Cops4O88544 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13□□□□□ -0.33
Cops4O88544 Gm42670-201ENSMUST00000201816 1292 ntBASIC13□□□□□ -0.33
Cops4O88544 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13□□□□□ -0.33
Cops4O88544 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cops4O88544 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cops4O88544 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cops4O88544 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Cops4O88544 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cops4O88544 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cops4O88544 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13□□□□□ -0.33
Cops4O88544 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cops4O88544 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.99□□□□□ -0.33
Cops4O88544 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cops4O88544 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.99□□□□□ -0.33
Cops4O88544 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.99□□□□□ -0.33
Cops4O88544 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.99□□□□□ -0.33
Cops4O88544 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.99□□□□□ -0.33
Cops4O88544 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.99□□□□□ -0.33
Cops4O88544 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Gm15590-201ENSMUST00000078419 552 ntBASIC12.99□□□□□ -0.33
Cops4O88544 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms