Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.14□□□□□ -0.63
Efnb3O35393 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.14□□□□□ -0.63
Efnb3O35393 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Efnb3O35393 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.14□□□□□ -0.63
Efnb3O35393 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.14□□□□□ -0.63
Efnb3O35393 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Gm37230-201ENSMUST00000194491 818 ntBASIC11.14□□□□□ -0.63
Efnb3O35393 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.14□□□□□ -0.63
Efnb3O35393 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.14□□□□□ -0.63
Efnb3O35393 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.14□□□□□ -0.63
Efnb3O35393 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.14□□□□□ -0.63
Efnb3O35393 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Efnb3O35393 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.14□□□□□ -0.63
Efnb3O35393 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.14□□□□□ -0.63
Efnb3O35393 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Efnb3O35393 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Efnb3O35393 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Efnb3O35393 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.14□□□□□ -0.63
Efnb3O35393 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Efnb3O35393 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Efnb3O35393 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Gm2272-201ENSMUST00000194903 582 ntBASIC11.13□□□□□ -0.63
Efnb3O35393 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.13□□□□□ -0.63
Efnb3O35393 Gm44771-201ENSMUST00000206975 626 ntBASIC11.13□□□□□ -0.63
Efnb3O35393 Gm45098-201ENSMUST00000207179 657 ntBASIC11.13□□□□□ -0.63
Efnb3O35393 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Efnb3O35393 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Efnb3O35393 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Efnb3O35393 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Efnb3O35393 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.12□□□□□ -0.63
Efnb3O35393 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.12□□□□□ -0.63
Efnb3O35393 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.12□□□□□ -0.63
Efnb3O35393 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.12□□□□□ -0.63
Efnb3O35393 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.12□□□□□ -0.63
Efnb3O35393 Gm16026-204ENSMUST00000162652 683 ntBASIC11.12□□□□□ -0.63
Efnb3O35393 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Gm6443-201ENSMUST00000203599 874 ntBASIC11.12□□□□□ -0.63
Efnb3O35393 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.12□□□□□ -0.63
Efnb3O35393 Gm45747-201ENSMUST00000212203 999 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms