Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Mir1897-201ENSMUST00000122581 272 ntBASIC13.26□□□□□ -0.29
Cx3cl1O35188 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.26□□□□□ -0.29
Cx3cl1O35188 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.26□□□□□ -0.29
Cx3cl1O35188 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cx3cl1O35188 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm15653-201ENSMUST00000119247 907 ntBASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm12428-201ENSMUST00000119844 727 ntBASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm14767-201ENSMUST00000121559 586 ntBASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.25□□□□□ -0.29
Cx3cl1O35188 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.25□□□□□ -0.29
Cx3cl1O35188 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cx3cl1O35188 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Auts2-212ENSMUST00000178555 309 ntBASIC13.24□□□□□ -0.29
Cx3cl1O35188 Gm27680-201ENSMUST00000184192 160 ntBASIC13.24□□□□□ -0.29
Cx3cl1O35188 Gm44344-201ENSMUST00000200287 129 ntBASIC13.24□□□□□ -0.29
Cx3cl1O35188 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms