Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Gm4804-201ENSMUST00000182234 999 ntBASIC13.83□□□□□ -0.2
Bhlhe40O35185 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Gm17795-201ENSMUST00000214505 757 ntBASIC13.83□□□□□ -0.2
Bhlhe40O35185 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.83□□□□□ -0.2
Bhlhe40O35185 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.83□□□□□ -0.2
Bhlhe40O35185 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Bhlhe40O35185 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.82□□□□□ -0.2
Bhlhe40O35185 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.82□□□□□ -0.2
Bhlhe40O35185 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Bhlhe40O35185 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.82□□□□□ -0.2
Bhlhe40O35185 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Bhlhe40O35185 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Gm5279-201ENSMUST00000199575 745 ntBASIC13.81□□□□□ -0.2
Bhlhe40O35185 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Gm19220-201ENSMUST00000222682 803 ntBASIC13.81□□□□□ -0.2
Bhlhe40O35185 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.81□□□□□ -0.2
Bhlhe40O35185 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.81□□□□□ -0.2
Bhlhe40O35185 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bhlhe40O35185 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms