Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Gm8410-201ENSMUST00000117225 605 ntBASIC13.46□□□□□ -0.25
Sh3yl1O08641 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Gm18766-201ENSMUST00000189811 808 ntBASIC13.46□□□□□ -0.25
Sh3yl1O08641 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.46□□□□□ -0.25
Sh3yl1O08641 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.46□□□□□ -0.25
Sh3yl1O08641 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sh3yl1O08641 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3yl1O08641 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3yl1O08641 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3yl1O08641 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3yl1O08641 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3yl1O08641 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3yl1O08641 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Sh3yl1O08641 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.45□□□□□ -0.26
Sh3yl1O08641 Gm9182-201ENSMUST00000217829 639 ntBASIC13.45□□□□□ -0.26
Sh3yl1O08641 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3yl1O08641 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Gm15693-201ENSMUST00000120470 637 ntBASIC13.44□□□□□ -0.26
Sh3yl1O08641 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Auts2-212ENSMUST00000178555 309 ntBASIC13.44□□□□□ -0.26
Sh3yl1O08641 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3yl1O08641 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms