Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcf11G3X9Z4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm26513-201ENSMUST00000181802 2489 ntBASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm5187-201ENSMUST00000117317 991 ntBASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm11400-201ENSMUST00000120853 1214 ntBASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm19184-201ENSMUST00000196798 928 ntBASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm43179-201ENSMUST00000198797 275 ntBASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcf11G3X9Z4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcf11G3X9Z4 Gm5620-201ENSMUST00000077991 1348 ntBASIC20.95■□□□□ 0.95
Pcf11G3X9Z4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Abhd6-203ENSMUST00000225234 1958 ntBASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Gm8706-201ENSMUST00000197372 1491 ntBASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcf11G3X9Z4 Gm45133-201ENSMUST00000207548 2773 ntBASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Gm38197-201ENSMUST00000192320 2122 ntBASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcf11G3X9Z4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms