Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim55G3X8Y1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim55G3X8Y1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim55G3X8Y1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim55G3X8Y1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim55G3X8Y1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trim55G3X8Y1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm8825-201ENSMUST00000182565 998 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm4518-201ENSMUST00000182638 718 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm19164-201ENSMUST00000210667 640 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim55G3X8Y1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms