Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.82■□□□□ 0.28
Ube4aE9Q735 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.82■□□□□ 0.28
Ube4aE9Q735 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm8584-201ENSMUST00000171982 758 ntBASIC16.82■□□□□ 0.28
Ube4aE9Q735 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm7561-201ENSMUST00000211203 886 ntBASIC16.82■□□□□ 0.28
Ube4aE9Q735 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gm9899-201ENSMUST00000065519 555 ntBASIC16.82■□□□□ 0.28
Ube4aE9Q735 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4aE9Q735 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.81■□□□□ 0.28
Ube4aE9Q735 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gm10012-201ENSMUST00000078252 192 ntBASIC16.81■□□□□ 0.28
Ube4aE9Q735 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ube4aE9Q735 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.8■□□□□ 0.28
Ube4aE9Q735 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ube4aE9Q735 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms