Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb9E9Q5G2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb9E9Q5G2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb9E9Q5G2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb9E9Q5G2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms