Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdr1E9Q0B4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
Cdr1E9Q0B4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdr1E9Q0B4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdr1E9Q0B4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdr1E9Q0B4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdr1E9Q0B4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdr1E9Q0B4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdr1E9Q0B4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdr1E9Q0B4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Cdr1E9Q0B4 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.83□□□□□ -0.19
Cdr1E9Q0B4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.83□□□□□ -0.19
Cdr1E9Q0B4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.83□□□□□ -0.19
Cdr1E9Q0B4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdr1E9Q0B4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdr1E9Q0B4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdr1E9Q0B4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdr1E9Q0B4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdr1E9Q0B4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdr1E9Q0B4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms