Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Trav11n-201ENSMUST00000200113 343 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 CT030653.1-201ENSMUST00000224382 1279 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Gm12943-201ENSMUST00000119616 210 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 Gm4879-201ENSMUST00000122190 1272 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Gm27046-201ENSMUST00000182160 463 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Gm37201-201ENSMUST00000191845 523 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC7.65□□□□□ -1.18
Herc1E9PZP8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Herc1E9PZP8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Gm23255-201ENSMUST00000102244 110 ntBASIC7.65□□□□□ -1.19
Herc1E9PZP8 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Gm11451-201ENSMUST00000118946 630 ntBASIC7.65□□□□□ -1.19
Herc1E9PZP8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Gm20694-201ENSMUST00000176943 404 ntBASIC7.65□□□□□ -1.19
Herc1E9PZP8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Rn7sk-201ENSMUST00000083103 331 ntBASIC7.65□□□□□ -1.19
Herc1E9PZP8 Gm26315-201ENSMUST00000083890 321 ntBASIC7.65□□□□□ -1.19
Herc1E9PZP8 Gm24447-201ENSMUST00000083977 338 ntBASIC7.65□□□□□ -1.19
Herc1E9PZP8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Herc1E9PZP8 Gm13182-201ENSMUST00000122241 312 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm3096-201ENSMUST00000185770 364 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm12419-201ENSMUST00000116649 636 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm14219-201ENSMUST00000120414 288 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm4797-201ENSMUST00000219075 1283 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm14350-201ENSMUST00000116642 640 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm16202-201ENSMUST00000117532 544 ntBASIC7.64□□□□□ -1.19
Herc1E9PZP8 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC7.64□□□□□ -1.19
Herc1E9PZP8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms