Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf11E9PZM7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Mir5120-201ENSMUST00000175020 78 ntBASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf11E9PZM7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Gm37489-201ENSMUST00000191883 159 ntBASIC19.3■□□□□ 0.68
Scaf11E9PZM7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scaf11E9PZM7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf11E9PZM7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm4081-201ENSMUST00000195287 1838 ntBASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm11618-201ENSMUST00000117946 267 ntBASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm11591-201ENSMUST00000120063 702 ntBASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf11E9PZM7 Gm14451-201ENSMUST00000121581 1542 ntBASIC19.27■□□□□ 0.68
Scaf11E9PZM7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf11E9PZM7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf11E9PZM7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf11E9PZM7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf11E9PZM7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms