Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Gm45331-201ENSMUST00000209868 554 ntBASIC16.1■□□□□ 0.17
Gm44503E9PYU5 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm13392-201ENSMUST00000117708 150 ntBASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm26464-201ENSMUST00000157094 305 ntBASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm24420-201ENSMUST00000176676 59 ntBASIC16.09■□□□□ 0.17
Gm44503E9PYU5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm37424-201ENSMUST00000191727 561 ntBASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm6091-201ENSMUST00000098307 165 ntBASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm44503E9PYU5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm44503E9PYU5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm44503E9PYU5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm44503E9PYU5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
Gm44503E9PYU5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm44503E9PYU5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm13689-201ENSMUST00000119360 685 ntBASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm14660-201ENSMUST00000119809 575 ntBASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Snora78-201ENSMUST00000158630 128 ntBASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm27731-201ENSMUST00000185192 107 ntBASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm44503E9PYU5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Gm8062-201ENSMUST00000139696 444 ntBASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.07■□□□□ 0.16
Gm44503E9PYU5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms