Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm15376-201ENSMUST00000122258 783 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm43118-201ENSMUST00000199149 775 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm7399-201ENSMUST00000032395 858 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm9823-201ENSMUST00000051212 327 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Gm6091-201ENSMUST00000098307 165 ntBASIC12.6□□□□□ -0.39
Shank1D3YZU1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shank1D3YZU1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shank1D3YZU1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 BC037039-201ENSMUST00000192003 2205 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm13689-201ENSMUST00000119360 685 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm11814-201ENSMUST00000119515 929 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm15429-201ENSMUST00000151268 798 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm11803-201ENSMUST00000119966 444 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm26464-201ENSMUST00000157094 305 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Gm8598-201ENSMUST00000221184 836 ntBASIC12.59□□□□□ -0.39
Shank1D3YZU1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.59□□□□□ -0.39
Shank1D3YZU1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Shank1D3YZU1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shank1D3YZU1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.58□□□□□ -0.39
Shank1D3YZU1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Shank1D3YZU1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms