Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Gm27628-201ENSMUST00000184911 107 ntBASIC11.83□□□□□ -0.52
BC048679D3YXE9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
BC048679D3YXE9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Gm8584-201ENSMUST00000171982 758 ntBASIC11.82□□□□□ -0.52
BC048679D3YXE9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BC048679D3YXE9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.81□□□□□ -0.52
BC048679D3YXE9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Gm16198-201ENSMUST00000118766 670 ntBASIC11.81□□□□□ -0.52
BC048679D3YXE9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.81□□□□□ -0.52
BC048679D3YXE9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.81□□□□□ -0.52
BC048679D3YXE9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BC048679D3YXE9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms