Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm1401-201ENSMUST00000122048 772 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Mir3113-201ENSMUST00000175478 76 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm29310-201ENSMUST00000185468 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21825-201ENSMUST00000185728 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm29109-201ENSMUST00000185895 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21896-201ENSMUST00000186520 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21873-201ENSMUST00000186728 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21794-201ENSMUST00000187056 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21880-201ENSMUST00000187275 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21826-201ENSMUST00000187451 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21198-201ENSMUST00000188393 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21749-201ENSMUST00000189343 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21901-201ENSMUST00000189568 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm29424-201ENSMUST00000189716 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm28599-201ENSMUST00000189838 694 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21867-201ENSMUST00000189917 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm29269-201ENSMUST00000190087 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21722-201ENSMUST00000190153 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm28423-201ENSMUST00000190701 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21899-201ENSMUST00000190745 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21910-201ENSMUST00000191163 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21849-201ENSMUST00000191571 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm28678-201ENSMUST00000191593 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm20910-201ENSMUST00000193268 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm21871-201ENSMUST00000194621 696 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 AA619741-201ENSMUST00000195095 646 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm18057-201ENSMUST00000208220 503 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm45612-201ENSMUST00000211320 160 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc22a28B2RT89 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Gm17271-201ENSMUST00000165535 355 ntBASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms