Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a6B1AVK5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm2991-201ENSMUST00000173338 480 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm37466-201ENSMUST00000195692 652 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm11591-201ENSMUST00000120063 702 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm3890-201ENSMUST00000182416 207 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Gm9368-201ENSMUST00000219348 831 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Col4a6B1AVK5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm12176-201ENSMUST00000121420 875 ntBASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm7046-201ENSMUST00000221351 977 ntBASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a6B1AVK5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Gm7809-201ENSMUST00000153199 742 ntBASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Mir7070-201ENSMUST00000183657 86 ntBASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms