Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Chd3B1AR17 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.76□□□□□ -0.21
Chd3B1AR17 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Gm25857-201ENSMUST00000082788 129 ntBASIC13.76□□□□□ -0.21
Chd3B1AR17 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.76□□□□□ -0.21
Chd3B1AR17 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.76□□□□□ -0.21
Chd3B1AR17 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Gm2445-201ENSMUST00000182798 989 ntBASIC13.76□□□□□ -0.21
Chd3B1AR17 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd3B1AR17 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.76□□□□□ -0.21
Chd3B1AR17 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd3B1AR17 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Chd3B1AR17 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm27701-201ENSMUST00000184498 110 ntBASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm8515-201ENSMUST00000194852 576 ntBASIC13.75□□□□□ -0.21
Chd3B1AR17 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd3B1AR17 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm26464-201ENSMUST00000157094 305 ntBASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.75□□□□□ -0.21
Chd3B1AR17 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.75□□□□□ -0.21
Chd3B1AR17 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.75□□□□□ -0.21
Chd3B1AR17 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.74□□□□□ -0.21
Chd3B1AR17 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chd3B1AR17 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.74□□□□□ -0.21
Chd3B1AR17 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chd3B1AR17 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chd3B1AR17 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd3B1AR17 Gm12091-201ENSMUST00000146791 830 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms