Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Gm13689-201ENSMUST00000119360 685 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 Gm12091-201ENSMUST00000146791 830 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 Gm45384-201ENSMUST00000210451 277 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.68□□□□□ -0.06
Scn1aA2APX8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn1aA2APX8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm15770-201ENSMUST00000117498 584 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm11918-201ENSMUST00000121660 179 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm27772-201ENSMUST00000184900 187 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm37917-201ENSMUST00000194711 392 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 Gm15823-201ENSMUST00000064305 670 ntBASIC14.67□□□□□ -0.06
Scn1aA2APX8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn1aA2APX8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Gm24420-201ENSMUST00000176676 59 ntBASIC14.66□□□□□ -0.06
Scn1aA2APX8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn1aA2APX8 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.66□□□□□ -0.06
Scn1aA2APX8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.66□□□□□ -0.06
Scn1aA2APX8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Gm27701-201ENSMUST00000184498 110 ntBASIC14.66□□□□□ -0.06
Scn1aA2APX8 Mir7654-201ENSMUST00000185082 70 ntBASIC14.66□□□□□ -0.06
Scn1aA2APX8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.66□□□□□ -0.06
Scn1aA2APX8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn1aA2APX8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn1aA2APX8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn1aA2APX8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn1aA2APX8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn1aA2APX8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms