Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm12072-201ENSMUST00000118293 715 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm15547-201ENSMUST00000122152 333 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm18552-201ENSMUST00000187425 538 ntBASIC7.24□□□□□ -1.25
Ubr4A2AN08 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ubr4A2AN08 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm12943-201ENSMUST00000119616 210 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm22138-201ENSMUST00000158748 128 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm8749-201ENSMUST00000117737 331 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm25700-201ENSMUST00000177693 110 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm26956-201ENSMUST00000182176 986 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm8756-201ENSMUST00000183250 929 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm42550-201ENSMUST00000201553 960 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm44064-201ENSMUST00000204964 1087 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm3793-201ENSMUST00000204973 672 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 AC123665.1-201ENSMUST00000228204 438 ntBASIC7.23□□□□□ -1.25
Ubr4A2AN08 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ubr4A2AN08 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Ubr4A2AN08 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ubr4A2AN08 AC158388.3-202ENSMUST00000225517 775 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms