Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm4875-201ENSMUST00000118257 786 ntBASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4a-psA0A0G2JFS9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm29741-201ENSMUST00000192667 421 ntBASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm44872-201ENSMUST00000207864 420 ntBASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4a-psA0A0G2JFS9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms