Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gm17271-201ENSMUST00000165535 355 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 Mir8117-201ENSMUST00000184773 107 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.54□□□□□ -0.56
Trav18A0A075B656 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gm11025-201ENSMUST00000140773 466 ntBASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.53□□□□□ -0.56
Trav18A0A075B656 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.53□□□□□ -0.56
Trav18A0A075B656 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav18A0A075B656 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav18A0A075B656 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms