Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb2S4R1M3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 AA543401-201ENSMUST00000164248 1269 ntBASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm7774-201ENSMUST00000200064 533 ntBASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm5779-201ENSMUST00000218467 910 ntBASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb2S4R1M3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Gm43575-201ENSMUST00000196420 516 ntBASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.1□□□□□ -0.15
H2afb2S4R1M3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb2S4R1M3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms