Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm27701-201ENSMUST00000184498 110 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm18307-201ENSMUST00000206864 949 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcb1Q9Z0H3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcb1Q9Z0H3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcb1Q9Z0H3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcb1Q9Z0H3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcb1Q9Z0H3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Mir698-201ENSMUST00000102164 109 ntBASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Smarcb1Q9Z0H3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Gm9002-201ENSMUST00000178437 499 ntBASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcb1Q9Z0H3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms