Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm12490-201ENSMUST00000120255 560 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm8584-201ENSMUST00000171982 758 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lhx9Q9WUH2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lhx9Q9WUH2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Gm6916-202ENSMUST00000205523 195 ntBASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.38□□□□□ -0.27
Lhx9Q9WUH2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lhx9Q9WUH2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms