Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CcsQ9WU84 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.98□□□□□ -0.65
CcsQ9WU84 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Gm27646-201ENSMUST00000183989 110 ntBASIC10.97□□□□□ -0.65
CcsQ9WU84 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CcsQ9WU84 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CcsQ9WU84 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.96□□□□□ -0.65
CcsQ9WU84 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm19164-201ENSMUST00000210667 640 ntBASIC10.96□□□□□ -0.65
CcsQ9WU84 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.96□□□□□ -0.65
CcsQ9WU84 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CcsQ9WU84 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms