Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube3bQ9ES34 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Mir698-201ENSMUST00000102164 109 ntBASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube3bQ9ES34 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube3bQ9ES34 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.71■□□□□ 0.26
Ube3bQ9ES34 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ube3bQ9ES34 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ube3bQ9ES34 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Gm18018-201ENSMUST00000198273 408 ntBASIC16.7■□□□□ 0.26
Ube3bQ9ES34 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.7■□□□□ 0.26
Ube3bQ9ES34 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms