Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.56□□□□□ -0.24
Ube4bQ9ES00 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm8097-201ENSMUST00000117903 829 ntBASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm21362-201ENSMUST00000194272 928 ntBASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube4bQ9ES00 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube4bQ9ES00 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gm15358-201ENSMUST00000119249 520 ntBASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gm8318-201ENSMUST00000182954 872 ntBASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube4bQ9ES00 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms