Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mir433-201ENSMUST00000093564 124 ntBASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-4Q9EQM3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Gm10156-201ENSMUST00000122364 462 ntBASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-4Q9EQM3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Gm8213-201ENSMUST00000118191 441 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Gm11793-201ENSMUST00000120433 981 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Mir7070-201ENSMUST00000183657 86 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Gm43133-201ENSMUST00000197472 463 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-4Q9EQM3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms