Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Cpsf1Q9EPU4 Gm16342-201ENSMUST00000124025 1025 ntBASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Gm15429-201ENSMUST00000151268 798 ntBASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Gm13886-201ENSMUST00000117876 1183 ntBASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cpsf1Q9EPU4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Gm5356-201ENSMUST00000093326 615 ntBASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf1Q9EPU4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Gm29608-201ENSMUST00000190444 463 ntBASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Cpsf1Q9EPU4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms