Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm18669-201ENSMUST00000216049 778 ntBASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Gm6296-201ENSMUST00000222599 943 ntBASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgn3Q9DCB1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Hmgn3Q9DCB1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgn3Q9DCB1 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms