Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.53■□□□□ 0.56
U2af1Q9D883 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
U2af1Q9D883 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm42612-201ENSMUST00000197986 623 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm43170-201ENSMUST00000199827 612 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm9797-201ENSMUST00000052902 613 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
U2af1Q9D883 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.52■□□□□ 0.56
U2af1Q9D883 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
U2af1Q9D883 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.52■□□□□ 0.56
U2af1Q9D883 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
U2af1Q9D883 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
U2af1Q9D883 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
U2af1Q9D883 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.52■□□□□ 0.56
U2af1Q9D883 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2af1Q9D883 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
U2af1Q9D883 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
U2af1Q9D883 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
U2af1Q9D883 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
U2af1Q9D883 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
U2af1Q9D883 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
U2af1Q9D883 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.51■□□□□ 0.55
U2af1Q9D883 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.51■□□□□ 0.55
U2af1Q9D883 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
U2af1Q9D883 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2af1Q9D883 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.5■□□□□ 0.55
U2af1Q9D883 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Gm8584-201ENSMUST00000171982 758 ntBASIC18.5■□□□□ 0.55
U2af1Q9D883 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.5■□□□□ 0.55
U2af1Q9D883 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2af1Q9D883 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2af1Q9D883 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms