Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.59■□□□□ 0.25
Smc3Q9CW03 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.59■□□□□ 0.25
Smc3Q9CW03 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc3Q9CW03 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.58■□□□□ 0.24
Smc3Q9CW03 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.58■□□□□ 0.24
Smc3Q9CW03 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.58■□□□□ 0.24
Smc3Q9CW03 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc3Q9CW03 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.57■□□□□ 0.24
Smc3Q9CW03 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.57■□□□□ 0.24
Smc3Q9CW03 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.57■□□□□ 0.24
Smc3Q9CW03 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.56■□□□□ 0.24
Smc3Q9CW03 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.56■□□□□ 0.24
Smc3Q9CW03 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc3Q9CW03 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.56■□□□□ 0.24
Smc3Q9CW03 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms