Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lrrc40Q9CRC8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lrrc40Q9CRC8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrrc40Q9CRC8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Gm27631-201ENSMUST00000184163 466 ntBASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrrc40Q9CRC8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gm5648-201ENSMUST00000122244 1587 ntBASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Lrrc40Q9CRC8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lrrc40Q9CRC8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms