Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gm13342-201ENSMUST00000121055 207 ntBASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Mir497b-201ENSMUST00000093601 125 ntBASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldnd1Q9CQX5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldnd1Q9CQX5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.33□□□□□ -0.11
Cldnd1Q9CQX5 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.33□□□□□ -0.11
Cldnd1Q9CQX5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldnd1Q9CQX5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldnd1Q9CQX5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldnd1Q9CQX5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 BC037039-201ENSMUST00000192003 2205 ntBASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm22018-201ENSMUST00000104357 131 ntBASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldnd1Q9CQX5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldnd1Q9CQX5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms