Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm13316-201ENSMUST00000140537 691 ntBASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh15Q99PJ1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Snord83b-201ENSMUST00000104546 94 ntBASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Gm14263-201ENSMUST00000117955 746 ntBASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Gm4768-201ENSMUST00000206199 686 ntBASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh15Q99PJ1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Gm14130-201ENSMUST00000118417 987 ntBASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Pcdh15Q99PJ1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh15Q99PJ1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gm6447-201ENSMUST00000118905 835 ntBASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gm28693-202ENSMUST00000190758 331 ntBASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdh15Q99PJ1 Gm23270-201ENSMUST00000104055 131 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm2231-201ENSMUST00000125661 612 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms