Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Gm37835-201ENSMUST00000193305 361 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Gm16479-201ENSMUST00000121706 932 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Gm9083-201ENSMUST00000120423 819 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Gm18212-201ENSMUST00000211678 889 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdh23Q99PF4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.06□□□□□ -0.16
Cdh23Q99PF4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm11222-201ENSMUST00000119005 738 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm20426-201ENSMUST00000173657 440 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm42997-202ENSMUST00000200321 985 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm14277-201ENSMUST00000121195 360 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm12208-201ENSMUST00000122004 163 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm45770-201ENSMUST00000212105 616 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm13570-201ENSMUST00000140763 309 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm3890-201ENSMUST00000182416 207 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh23Q99PF4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Gm44545-201ENSMUST00000208262 746 ntBASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh23Q99PF4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms