Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkd1Q99MH6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Gm27920-201ENSMUST00000183953 96 ntBASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkd1Q99MH6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Gm44492-201ENSMUST00000197012 141 ntBASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkd1Q99MH6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Gm11543-201ENSMUST00000120758 370 ntBASIC13.28□□□□□ -0.28
Nkd1Q99MH6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkd1Q99MH6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms