Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm5187-201ENSMUST00000117317 991 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm15240-201ENSMUST00000118156 720 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Gm38671-201ENSMUST00000200573 130 ntBASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Mir3102-201ENSMUST00000175555 104 ntBASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-1Q99MA9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 Gm12384-201ENSMUST00000119228 919 ntBASIC13.17□□□□□ -0.3
Nkx6-1Q99MA9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms