Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.38□□□□□ -0.43
Scrt1Q99M85 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.38□□□□□ -0.43
Scrt1Q99M85 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.37□□□□□ -0.43
Scrt1Q99M85 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.37□□□□□ -0.43
Scrt1Q99M85 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.37□□□□□ -0.43
Scrt1Q99M85 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.37□□□□□ -0.43
Scrt1Q99M85 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scrt1Q99M85 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.36□□□□□ -0.43
Scrt1Q99M85 Gm9229-201ENSMUST00000222777 126 ntBASIC12.36□□□□□ -0.43
Scrt1Q99M85 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.36□□□□□ -0.43
Scrt1Q99M85 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.36□□□□□ -0.43
Scrt1Q99M85 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms