Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1b1Q99LU0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm23935-201ENSMUST00000102303 57 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm24270-201ENSMUST00000102326 57 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm24245-201ENSMUST00000157318 57 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm45612-201ENSMUST00000211320 160 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1b1Q99LU0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1b1Q99LU0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Gm14042-201ENSMUST00000120139 833 ntBASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms