Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cttnbp2nlQ99LJ0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.3□□□□□ -0.12
Cttnbp2nlQ99LJ0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cttnbp2nlQ99LJ0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cttnbp2nlQ99LJ0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cttnbp2nlQ99LJ0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cttnbp2nlQ99LJ0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 AV026068-213ENSMUST00000223675 1171 ntBASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cttnbp2nlQ99LJ0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm9182-201ENSMUST00000217829 639 ntBASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cttnbp2nlQ99LJ0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cttnbp2nlQ99LJ0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Gm5864-201ENSMUST00000202263 970 ntBASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cttnbp2nlQ99LJ0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cttnbp2nlQ99LJ0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cttnbp2nlQ99LJ0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms