Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm18054-201ENSMUST00000207539 555 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm8598-201ENSMUST00000221184 836 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.8□□□□□ -0.04
Clp1Q99LI9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clp1Q99LI9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.79□□□□□ -0.04
Clp1Q99LI9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.79□□□□□ -0.04
Clp1Q99LI9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Gm6013-201ENSMUST00000212264 699 ntBASIC14.78□□□□□ -0.04
Clp1Q99LI9 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.78□□□□□ -0.04
Clp1Q99LI9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.78□□□□□ -0.04
Clp1Q99LI9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clp1Q99LI9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.78□□□□□ -0.04
Clp1Q99LI9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Clp1Q99LI9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms