Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Gm11814-201ENSMUST00000119515 929 ntBASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Gm4804-201ENSMUST00000182234 999 ntBASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.07□□□□□ -0.16
Cstf1Q99LC2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Gm8652-201ENSMUST00000181363 964 ntBASIC14.06□□□□□ -0.16
Cstf1Q99LC2 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf1Q99LC2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms