Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Gm11543-201ENSMUST00000120758 370 ntBASIC12.85□□□□□ -0.35
Lims1Q99JW4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.85□□□□□ -0.35
Lims1Q99JW4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.85□□□□□ -0.35
Lims1Q99JW4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.85□□□□□ -0.35
Lims1Q99JW4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm29310-201ENSMUST00000185468 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21825-201ENSMUST00000185728 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm29109-201ENSMUST00000185895 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21896-201ENSMUST00000186520 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21873-201ENSMUST00000186728 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21794-201ENSMUST00000187056 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21880-201ENSMUST00000187275 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21826-201ENSMUST00000187451 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21198-201ENSMUST00000188393 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21749-201ENSMUST00000189343 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21901-201ENSMUST00000189568 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm29424-201ENSMUST00000189716 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm28599-201ENSMUST00000189838 694 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21867-201ENSMUST00000189917 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm29269-201ENSMUST00000190087 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21722-201ENSMUST00000190153 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm28423-201ENSMUST00000190701 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21899-201ENSMUST00000190745 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21910-201ENSMUST00000191163 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21849-201ENSMUST00000191571 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm28678-201ENSMUST00000191593 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm20910-201ENSMUST00000193268 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm21871-201ENSMUST00000194621 696 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.84□□□□□ -0.35
Lims1Q99JW4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lims1Q99JW4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms