Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.2■□□□□ 0.18
Rfc4Q99J62 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Gm19078-201ENSMUST00000206311 727 ntBASIC16.2■□□□□ 0.18
Rfc4Q99J62 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.2■□□□□ 0.18
Rfc4Q99J62 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.19■□□□□ 0.18
Rfc4Q99J62 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Gm12928-201ENSMUST00000117115 573 ntBASIC16.19■□□□□ 0.18
Rfc4Q99J62 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Gm11524-201ENSMUST00000119349 807 ntBASIC16.19■□□□□ 0.18
Rfc4Q99J62 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Gm7287-201ENSMUST00000205267 602 ntBASIC16.19■□□□□ 0.18
Rfc4Q99J62 Gm18027-201ENSMUST00000218947 619 ntBASIC16.19■□□□□ 0.18
Rfc4Q99J62 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rfc4Q99J62 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.18■□□□□ 0.18
Rfc4Q99J62 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Gm13392-201ENSMUST00000117708 150 ntBASIC16.18■□□□□ 0.18
Rfc4Q99J62 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Snora78-201ENSMUST00000158630 128 ntBASIC16.18■□□□□ 0.18
Rfc4Q99J62 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.18■□□□□ 0.18
Rfc4Q99J62 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc4Q99J62 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm8062-201ENSMUST00000139696 444 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm17420-201ENSMUST00000164753 153 ntBASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rfc4Q99J62 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc4Q99J62 Gm8652-201ENSMUST00000181363 964 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms