Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm27772-201ENSMUST00000184900 187 ntBASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm29741-201ENSMUST00000192667 421 ntBASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.6■□□□□ 0.25
Col20a1Q923P0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col20a1Q923P0 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.6■□□□□ 0.25
Col20a1Q923P0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm15678-201ENSMUST00000117573 960 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.59■□□□□ 0.25
Col20a1Q923P0 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.59■□□□□ 0.25
Col20a1Q923P0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col20a1Q923P0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col20a1Q923P0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col20a1Q923P0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col20a1Q923P0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col20a1Q923P0 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.58■□□□□ 0.25
Col20a1Q923P0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col20a1Q923P0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.58■□□□□ 0.24
Col20a1Q923P0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Gm28911-201ENSMUST00000188837 117 ntBASIC16.58■□□□□ 0.24
Col20a1Q923P0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.58■□□□□ 0.24
Col20a1Q923P0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Gm19078-201ENSMUST00000206311 727 ntBASIC16.58■□□□□ 0.24
Col20a1Q923P0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.58■□□□□ 0.24
Col20a1Q923P0 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.58■□□□□ 0.24
Col20a1Q923P0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col20a1Q923P0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Gm11524-201ENSMUST00000119349 807 ntBASIC16.57■□□□□ 0.24
Col20a1Q923P0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Gm8584-201ENSMUST00000171982 758 ntBASIC16.57■□□□□ 0.24
Col20a1Q923P0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms