Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm24543-201ENSMUST00000103867 82 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm13453-201ENSMUST00000118708 357 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm14767-201ENSMUST00000121559 586 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Auts2-212ENSMUST00000178555 309 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm27618-201ENSMUST00000183671 60 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Mir7023-201ENSMUST00000185093 64 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 AA619741-201ENSMUST00000195095 646 ntBASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha3Q91Y16 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Gm17837-201ENSMUST00000186435 985 ntBASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Gm45453-201ENSMUST00000211758 853 ntBASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha3Q91Y16 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Gm15653-201ENSMUST00000119247 907 ntBASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms