Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm21470-201ENSMUST00000187680 696 ntBASIC15□□□□□ -0.01
Pcdha9Q91Y11 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15□□□□□ -0.01
Pcdha9Q91Y11 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdha9Q91Y11 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Gm27989-201ENSMUST00000184721 107 ntBASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Mir7023-201ENSMUST00000185093 64 ntBASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdha9Q91Y11 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.97□□□□□ -0.01
Pcdha9Q91Y11 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms