Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm29516-201ENSMUST00000190402 468 ntBASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm5605-201ENSMUST00000208940 1305 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm14905-201ENSMUST00000122351 639 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm43531-201ENSMUST00000200676 1114 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb20Q91XZ9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb20Q91XZ9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb20Q91XZ9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb20Q91XZ9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb20Q91XZ9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Efs-202ENSMUST00000227037 2540 ntBASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm29310-201ENSMUST00000185468 696 ntBASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm21825-201ENSMUST00000185728 696 ntBASIC13.89□□□□□ -0.19
Pcdhb20Q91XZ9 Gm29109-201ENSMUST00000185895 696 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms